基于转录组学和网络药理学探究清眩润目饮治疗干眼的作用机制
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1.黑龙江中医大学;2.张家港市中医医院;3.黑龙江中医药大学附属第一医院

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国家自然科学基金(No.81973908);黑龙江中医药大学研究生创新科研项目(No.2023yjscx018)


Exploring the Mechanism of Action of Qingxuan Runmu Yin in the Treatment of Dry Eye Based on Transcriptomics and Network PharmacologyLiu Ying1,Zhao Shanshan1,Huang Jiayu2,Yao Jing3
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Affiliation:

1.Heilongjiang University of Chinese Medicine;2.Zhangjiagang Hospital of Traditional Chinese Medicine;3.The First Affiliated Hospital of Heilonjiang University of Chinese Medicine

Fund Project:

National Natural Science Foundation of China (No.81973908); Postgraduate Innovation Fund of Heilongjiang University of Chinese Medicine(No.2023yjscx018)

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    摘要:

    目的:基于转录组学和网络药理学探究清眩润目饮(Qingxuan Runmu Yin,QRY)治疗干眼(DE)的作用机制,并通过干眼动物模型对QRY的药效和关键靶点进行实验验证。方法:运用RNA高通量测序(RNA-sequencing, RNA-seq)技术检测干眼小鼠与正常小鼠的差异表达基因(differentially expressed genes,DEGs),通过数据库筛选QRY有效成分及作用靶点,将二者重叠获取关键靶点后进行GO功能和KEGG富集分析,构建“药物-成分-靶点-信号通路”网络并分析蛋白质相互作用(protein-protein interaction,PPI);自动物实验开始每7日对小鼠行SIT、BUT、FL检查;HE染色观察小鼠角膜组织病理变化;Elisa、Western blot、qRT-PCR验证小鼠角膜组织中核心靶点的mRNA和蛋白表达水平。结果:获得DEGs 2234个、QRY有效成分233个及相关靶点457个,获得关键靶点64个,GO与KEGG分析结果提示与炎症反应密切相关,通过PPI网络筛选出IL-6等19个核心靶点;QRY组的SIT、BUT、FL结果与模型组相比,差异有统计学意义(p<0.05);HE染色结果示模型组角膜上皮细胞分层紊乱且角膜形态发生改变,QRY组可以改善角膜粗糙及分层紊乱的情况,形态接近空白组;Elisa、Western blot、qRT-PCR结果示QRY组的IL-1β、IL-6、TNF-α的RNA水平与蛋白表达对比模型组呈现相似的下降趋势。结论:清眩润目饮通过多成分、多靶点、多通路联合发挥作用,利用quercetin等主要成分对IL-6、IL-1β、TNF等靶点进行调控从而抑制AGE-RAGE/TNF/IL-17等信号通路以实现对干眼的治疗作用。

    Abstract:

    AIM:This study investigate the mechanism of action of Qingxuan Runmu Yin(QRY) in the treatment of dry eye based on transcriptomics and network pharmacology approaches. Further,the mice model of dry eye was employed to validate the efficacy and key targets of the QRY. METHODS:Using RNA-seq technology to detect differentially expressed genes (DEGs) between mice in the dry eye group and mice in the normal group, we screened the active ingredients and potential targets of QRY through the TCMSP and TCMIP databases, and then overlapped the two targets to obtain the key targets and then carried out the GO function and KEGG enrichment analysis , so as to build a network of "Drug-Component-Target-Signalling Pathway protein-protein interaction(PPI); mice were examined for SIT, BUT, and FL every 7 days from the beginning of the animal experiments; HE staining was performed to observe pathological changes in mouse corneal tissues; Elisa, Western blot and qRT-PCR were performed to verify the mRNA and protein expression levels of the core targets in mouse corneal tissues. RESULTS:2234 DEGs in dry eye mice and normal mice, 233 active ingredients and 457 related targets of QRY, a total of 64 overlapping targets were obtained, the results of the analysis of the GO function and KEGG pathway showed that they were closely related to the inflammatory , and core targets such as IL-1β, IL-6, and TNF were screened by PPI network construction; the results of SIT, BUT and FL in the QRY group were statistically significant compared with those in the model group (p <0.05), the results of HE staining showed that the corneal epithelial cell stratification was disordered and the corneal morphology was changed in the dry eye model group, while QRY group could effectively improve the corneal roughness and stratification disorder, and the morphology was close to that of the blank group after the treatment; the results of Elisa, Western blot and qRT-PCR showed that the RNA levels of IL-1β, IL-6, and TNF-α in the QRY group and the protein expression showed a similar decreasing trend compared with that of the model group. CONCLUSIONS:The results indicate that QRY works through the combination of multi-components, multi-targets and multi-pathways, and uses quercetin and other main components to regulate the core targets such as IL-1β, IL-6, TNF and so on, thus inhibiting the AGE-RAGE/TNF/IL-17 signalling pathway to achieve effective treatment of dry eye.

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  • 收稿日期:2023-12-13
  • 最后修改日期:2024-03-19
  • 录用日期:2024-04-18
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